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Biodiversity Heritage Library - Program news and collection highlights from BHL
BHL News, Blog Reel, Featured Books

The John Torrey Papers: Increasing Accessibility with Full Text Transcriptions in BHL

screenshot of a transcription in the from the page platform
black and white portrait of a young man, john torrey

Drawing of John Torrey by Sir Daniel MacNee. From the collection of Sir William Hooker, The Royal Botanic Gardens at Kew, England.

Since July 2016, the papers of taxonomic botanist John Torrey (1796-1873) have been the focus of a digitization and crowdsourced transcription project at the New York Botanical Garden (NYBG). Digitizing and Transcribing the John Torrey Papers, organized in coordination with the Biodiversity Heritage Library (BHL) and funded by the National Endowment for the Humanities and the Carnegie Corporation of New York, was created in an effort to digitize and make virtually accessible the correspondence of John Torrey and his colleagues, specifically letters received by Dr. Torrey.

Access to the correspondence of Dr. Torrey is particularly useful to natural scientists and natural historians alike as these letters provide a glimpse into the thought process and workflow for many of the 19th century’s greatest botanical minds. These letters are filled with a variety of different content, including commentary on plant taxonomy, personal biographical details, and anecdotal information on the daily lives of these natural scientists. The content within these letters aid in our understanding of the realities faced by these pioneering botanists, including the shift from the Linnaean system to the natural system and the systemic challenges faced by individuals in an emerging profession..

The John Torrey Papers collection contains over 9,500 pages from more than 350 correspondents, including Asa Gray, Amos Eaton, and Joseph Henry. The collection is organized alphabetically by correspondent then chronologically by the date each letter was written. Each page of each letter is scanned as a .tif file and uploaded to Macaw, BHL’s metadata management system, which aggregates the .tif file with a New York Botanical Garden MARC XML record. Once appropriate metadata has been applied in Macaw, the correspondence are uploaded to the Biodiversity Heritage Library Collection in the Internet Archive. The correspondence’s placement in the BHL Collection then allows for BHL to harvest new material from the Internet Archive on a weekly basis.

Digital content management is a crucial aspect of the project, but the heart of the process lies in the crowdsourced transcriptions done by volunteers from the New York Botanical Garden. These volunteers, recruited through citizen science outreach events, workshops, and tabling opportunities at various locations, work on the transcription platform From the Page, which is one of three transcription platforms whose exports are currently accepted by the Biodiversity Heritage Library, allowing the automatically-generated OCR for these items to be replaced with crowdsourced transcriptions, enabling full text search.

FTP Example Screenshot.PNG

A screenshot of a completed transcription from John Pierce Brace to John Torrey (May 1831) in From the Page.

The work done by these volunteers is a contribution to the project for two reasons. First, the handwriting, colloquialisms, and personal shorthand of many of Dr. Torrey’s correspondents are exceptionally difficult to read or interpret. With the correspondence of many correspondents containing several hundred pages, it takes a considerable amount of time for our volunteers to develop a proficiency capable of not only accurately deciphering poor handwriting but also of uncovering the intention or context of particular writings.

Second, the transcriptions produced by the Garden’s volunteers coupled with BHL’s new support for transcriptions facilitates full text searching of materials that would otherwise be unavailable. The introduction of full text searching to the world of transcriptions is extremely impactful as it allows researchers to execute a more thorough examination of resources available to them at a faster pace and with higher levels of productivity. A prime example of this is the Biodiversity Heritage Library’s page index of scientific names, as seen in the lower left hand corner of the figure below.

In effect, the Digitizing and Transcribing the John Torrey Paper’s volunteers are the bridge between the content we are looking for and how we look for it.

BHL Blog Screenshot.PNG

Screenshot of the completed John Pierce Brace page once the transcription and image files have been matched in BHL.

To date, more than 7,000 pages have been transcribed and more than 6,000 transcribed pages are available for view in BHL, but the goals of the Digitizing and Transcribing the John Torrey Papers project still have not been met.

With less than 1,500 pages remaining, the New York Botanical Garden is in search of new volunteers to help reach our goal and transcribe some of our most interesting correspondents remaining to be done such as William Jackson Hooker, the former Director of the Royal Botanic Gardens, Kew, and New England natural scientist Dewey Chester. While many of our volunteers are drawn to the project due to their interest in botany, many more are captivated by narratives not typically associated with botany, such as Carl Bogenhard’s struggles as an immigrant in the United States or Jacob Whitman Bailey’s experimentation with photography.

If you would like to become a volunteer transcriber for the Digitizing and Transcribing the John Torrey papers project, you can sign up online here or email [email protected] for more information or assistance with the sign up process.

If you would like to learn more about the life of John Torrey, works he published, or plants named after him, please visit out digital exhibit “John Torrey: American Botanist.”

September 24, 2019by Joel Richard
Blog Reel

Happy Birthday to John Torrey!

It’s hard to imagine how the wild, western terrain of the United States looked just 200 years ago—try to replace the suburban communities, bright lights, interconnected highways, and towering buildings with the uninhibited growth of native plants in considerable number and variety occupying undeveloped and spacious lands. The pioneers that ventured beyond the Mississippi into this vast unknown were exalted as executors of manifest destiny, responsible for territorial expansion of the fledgling county. But for John Torrey, he saw this point in history not as an opportunity to advance American boundaries, but as the precise moment to advance scientific progress.
View Full Size Image
A portrait of the birthday boy, John Torrey.
From the New York Botanical Garden’s
John Torrey Papers collection.

Torrey was a different kind of pioneer, not an explorer, preferring instead the excitement of discoveries made under the microscope, to which he dedicated his life and his passions. So, this week we take a break from the regular Book of the Week posts to recognize Torrey on his 217th birthday for the significant contributions he made to botany, chemistry, and our understanding of North American flora.

Torrey was born August 15, 1796, in New York City to an established New England family, Captain William Torrey and Margaret Nichols. As a young man, Torrey showed great curiosity and interest in many subjects, but especially mechanics, thinking he might become a machinist. But when his father was appointed as Fiscal Agent of the State Prison in Greenwich, Torrey had a chance encounter with prisoner, and botanist in his own right, Amos Eaton. Eaton provided rudimentary instruction to Torrey, but, most significantly, awakened a zeal for the subject that remained with him throughout his life.

At first Torrey sought to cultivate this passion primarily as a leisure activity and pursued a medical degree, graduating and starting a moderately successful practice. But during his studies, Torrey made time to cofound the Lyceum of Natural History, now the New York Academy of Science; began documenting the plants in his vicinity; and published his first tome, “A Catalogue of Plants Growing Spontaneously Within Thirty Miles of the City of New York.”

His numerous correspondences with prominent scientists of the day can be viewed in the BHL and reflect the reach he had in contemporary academia, including contributions to the Smithsonian Institution, the American Philosophical Society, the New York Botanical Gardens, and the National Academy of Sciences at Washington, D.C.

Torrey was drawn to botany, but definitely not to fieldwork. He enjoyed the comforts of home and “considered it a great hardship to be sent after dark in the country.” So Torrey stayed in New York during Stephen Long’s exploration of the Rocky Mountains. And he also didn’t join John Frémont’s expedition to the same range. But that didn’t stop him from using the data and samples collected during Long and Frémont’s travels to name and describe thousands of new species and varieties of plants.

 
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Torrey preferred his bed to landscapes like this one at the Hill of Columnar Basalt, 
illustrated during the 1842 Frémont expedition. 
 

Some of the most notable works he authored include “Flora of the Northern and Middle Sections of the United States,” his extensive two-volume “Flora of the State of New York,” and the joint piece he wrote with Asa Gray “Flora of North America,” which was considered one of the most authoritative works on North American plants up to that time.

Torrey was known as a professor, botanist, chemist, and mineralogist and remembered for identifying, describing, and classifying much of what inhabited the rugged frontier. He was a pioneer for the American scientific community with the fundamental contributions he made to botanical knowledge and institutions. The last line in Torrey’s obituary by friend, co-author, and protégée Asa Gray perfectly encapsulates this lasting legacy:
“Thirty or forty years ago, a new and remarkable evergreen tree was discovered in our own Southern States, which it was at once determined should bear Dr. Torrey’s name. More recently a congener was found in the noble forests of California. Another species had already been recognized in Japan, and lately a fourth in the mountains of Northern China. All four of them have been introduced and are greatly prized as ornamental trees in Europe. So that, all round the world, Torreya taxifolia, Torreya Californica, Torreya nucifera, and Torreya grandis—as well as his own important contributions to botany, of which they are a memorial—should keep our associate’s memory as green as their own perpetual verdure.”
Couldn’t say it better than that. Happy birthday, John Torrey!

 

View Full Size Image
Torreya Californica, one of the legacy trees named in honor of Torrey, 
from trees.stanford.edu.

References:

  •  John Torrey. (2013). In Encyclopædia Britannica. Retrieved from http://www.britannica.com/EBchecked/topic/600140/John-Torrey
  • Polunin, Nicholas. (1944). John Torrey: American Botanist. Nature, 154(3905), p. 294-295.
  • Gray, Asa. (1873, April). Memoir or John Torrey 1797-1873. Speech read before the National Academy.

 

August 15, 2013by scstanley

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The Biodiversity Heritage Library (BHL) is the world’s largest open access digital library for biodiversity literature and archives. BHL operates as a worldwide consortium of natural history, botanical, research, and national libraries working together to digitize the natural history literature held in their collections and make it freely available for open access as part of a global “biodiversity community.”

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